ConfigurationTreeCellRenderer myCellRenderer
javax.swing.JTree myTree
java.lang.Object myResult
Configuration myConfiguration
javax.swing.JTree myConfigurationTree
ConfigurationTreePopupListener myPopupListener
javax.swing.JButton myPreviousButton
javax.swing.JButton myNextButton
javax.swing.JButton myOKButton
java.lang.reflect.Constructor<T>[] myConstructors
int myConstructorIndex
float[][] A
float[][] B
float[][] C
float[][] D
float[] x
Units[] myOutputUnits
LinearApproximator[] myComponents
int[][] myDimensions
Function[] myFunctions
float[] myCoefficients
float[][] myEvalPoints
float[][] myValues
float[] myStartingCoefficients
GradientDescentApproximator.Constraints myConstraints
int myMaxIterations
float myRate
float myTolerance
boolean myIgnoreBias
GradientDescentApproximator.Constraints myConstraints
boolean myIgnoreBiasFlag
LinearApproximator[] myApproximators
int[][] myIndices
int[] myDimensions
float[][] myEvalPoints
float[][] myValues
Function myFunction
NumericallyDifferentiableFunction.NumericalDerivative myDerivative
Function myFunction
int myDerivativeDimension
float myDelta
PDF myPDF
float myLow
float myHigh
float myInflection
float myMultiplier
Function myDerivative
int myDimension
TimeSeries myTimeSeries
float[][] myEvalPoints
float[][] myValues
float[][] myNoisyValues
Function myCostFunction
int mySignalLength
boolean myQuiet
double[][] myGammaInverse
java.lang.String myName
java.util.Map<K,V> myStateNames
SimulationMode myMode
boolean myCollectSpikesFlag
int myCollectSpikesRatio
java.lang.String myDocumentation
Node[] myNodes
java.util.Map<K,V> myOrigins
java.util.Map<K,V> myTerminations
java.lang.String myName
SimulationMode myMode
java.util.Map<K,V> myOrigins
java.util.Map<K,V> myTerminations
java.lang.String myDocumentation
Node myNode
java.lang.String myName
int myDimension
Units myUnits
InstantaneousOutput myValues
Noise myNoise
Noise[] myNoises
boolean myRequiredOnCPU
Node myNode
DynamicalSystem myDynamics
Integrator myIntegrator
java.lang.String myName
InstantaneousOutput myInput
TimeSeries myOutput
boolean myModulatory
float[] notConnectedInput
float defVal
ExpandableNode[] myExpandableNodes
java.util.Map<K,V> myExpandedTerminations
Node myNode
java.lang.String myName
Termination[] myNodeTerminations
java.lang.String myName
Function[] myFunctions
Units myUnits
float myTime
BasicOrigin myOrigin
java.lang.String myDocumentation
Node myNode
java.lang.String myName
float myTauPSC
boolean myModulatory
float[] myInitialWeights
float[] myWeights
float[] myWeightProbabilities
java.util.Random random
float myCurrent
float myNetSpikeInput
float myNetRealInput
float[] myPreciseSpikeInputTimes
float myIntegrationTime
InstantaneousOutput myRawInput
int myNumNodes
int myDimension
int[] myNodeDimensions
NEFEnsembleImpl[] myNodes
java.util.Map<K,V> myOrigins
int myNeurons
java.lang.String myName
NetworkArrayImpl myParent
Origin[] myOrigins
int myDimensions
java.util.Map<K,V> myNodeMap
java.util.Map<K,V> myProjectionMap
java.lang.String myName
SimulationMode myMode
java.util.List<E> myFixedModes
Simulator mySimulator
float myStepSize
java.util.Map<K,V> myProbeables
java.util.Map<K,V> myProbeableStates
java.util.Map<K,V> myExposedOrigins
java.util.Map<K,V> myExposedTerminations
java.util.LinkedList<E> OrderedExposedOrigins
java.util.LinkedList<E> OrderedExposedTerminations
java.lang.String myDocumentation
java.util.Map<K,V> myMetaData
java.util.Map<K,V> myExposedOriginNames
java.util.Map<K,V> myExposedTerminationNames
int myNumGPU
int myNumJavaThreads
boolean myUseGPU
Node myNode
Termination myWrapped
java.lang.String myName
Function myFunction
float myPeriod
PDF myPDF
DynamicalSystem myDynamics
Integrator myIntegrator
float myLastGenTime
float myLastDynamicsTime
float[] myLastRawNoise
float[] myCurrentRawNoise
Units[] myUnits
float[] myInitialState
java.lang.String myName
int myDimension
java.util.Map<K,V> myTerminations
BasicOrigin myOrigin
java.lang.String myDocumentation
Node myNode
java.lang.String myName
int myDimension
float[][] myTransform
InstantaneousOutput myValues
boolean[] myValues
float[] mySpikeTimes
Units myUnits
float myTime
Origin myOrigin
Termination myTermination
Network myNetwork
boolean myBiasIsEnabled
NEFEnsemble myInterneurons
BiasOrigin myBiasOrigin
BiasTermination myDirectBT
BiasTermination myIndirectBT
DecodedTermination myInterneuronTermination
float[] myValues
Units myUnits
float myTime
boolean[] myValues
Units myUnits
float myTime
float myTauEA
float myMaxIsometricForce
Function myCEForceLength
Function myCEForceVelocity
Function mySEForceLength
RootFinder myRootFinder
Units[] myUnits
float[] myState
java.lang.String myName
DynamicalSystem myDynamics
java.util.Map<K,V> myJointDefinitions
SkeletalMuscle[] myMuscles
Function[] myLengths
Function[] myMomentArms
java.util.Properties myStates
float myTimeStep
float myTime
java.lang.String myDocumentation
java.lang.String myName
BasicTermination myTermination
DynamicalSystem myEADynamics
DynamicalSystem myAFDynamics
Integrator myIntegrator
float myLength
java.lang.String myDocumentation
TimeSeries myActivationHistory
TimeSeries myForceHistory
TimeSeries myLengthHistory
NEFEnsemble myInterneurons
float[][] myConstantOutputs
java.util.Map<K,V> myDecodedOrigins
java.util.Map<K,V> myDecodedTerminations
ApproximatorFactory myApproximatorFactory
java.util.Map<K,V> myApproximators
float myTime
Node myNode
java.lang.String myName
Node[] myNodes
java.lang.String myNodeOrigin
Function[] myFunctions
float[][] myDecoders
SimulationMode myMode
RealOutput myOutput
Noise myNoise
Noise[] myNoises
DynamicalSystem mySTPDynamicsTemplate
DynamicalSystem[] mySTPDynamics
Integrator myIntegrator
float[] mySTPHistory
float myTime
boolean myRequiredOnCPU
ExpressModel myExpressModel
Node myNode
java.lang.String myName
int myOutputDimension
float[][] myTransform
LinearSystem myDynamicsTemplate
LinearSystem[] myDynamics
Integrator myIntegrator
Units[] myNullUnits
RealOutput myInputValues
float myTime
float[] myOutputValues
boolean myTauMutable
DecodedTermination myScalingTermination
float[] myStaticBias
float myTau
boolean myModulatory
float[][] myInitialState
boolean myValuesSet
ApproximatorFactory myApproximatorFactory
VectorGenerator myEncoderFactory
VectorGenerator myEvalPointFactory
NodeFactory myNodeFactory
int myDimension
float[][] myEncoders
java.util.Map<K,V> myDecodingApproximators
boolean myReuseApproximators
float[][] myUnscaledEvalPoints
float[][] myEvalPoints
float[] myRadii
float[] myInverseRadii
boolean myRadiiAreOne
DynamicalSystem myDirectModeDynamics
Integrator myDirectModeIntegrator
java.util.List<E> myFixedModes
NEFEnsembleFactory myEnsembleFactory
boolean myUseGPU
SimulationMode myMode
float myTauRef
float myTauRC
float myTauN
float myIncN
float myInitialVoltage
float myV
float myN
float myTimeSinceLastSpike
float[] myTime
float[] myVHistory
float[] myNHistory
float[] myRateHistory
DynamicalSystem myDynamics
Integrator myIntegrator
TimeSeries myDynamicsOutput
int myVDim
float mySpikeThreshold
float myMinIntraSpikeTime
float myLastSpikeTime
SimulationMode myMode
SimulationMode[] mySupportedModes
Function myConstantRateFunction
boolean myConstantRateFunctionOK
float[] myCurrents
float myTransientTime
ExpandableSynapticIntegrator mySynapticIntegrator
LinearExponentialTermination myDopamineTermination
GruberSpikeGenerator mySpikeGenerator
GruberSpikeGenerator.GruberDynamics myDynamics
Integrator myIntegrator
float myDopamine
float myLastSpikeTime
TimeSeries myMembranePotentialHistory
Function mySteadyStateVmFunction
SimulationMode myMode
SimulationMode[] mySupportedModes
double myA
double myB
double myC
double myD
double myInitialVoltage
IzhikevichSpikeGenerator.Preset myPreset
double myVoltage
double myRecovery
float[] myTime
float[] myVoltageHistory
float[] myRecoveryHistory
float mySpikeRate
SimulationMode myMode
float myMaxTimeStep
float myTauRC
float myTauRef
float myInitialVoltage
float myVoltage
float myTimeSinceLastSpike
float myPreviousVoltage
float[] myTime
float[] myVoltageHistory
SimulationMode myMode
SimulationMode[] mySupportedModes
Units myUnits
float myMaxTimeStep
Function myRateFunction
SimulationMode myMode
PoissonSpikeGenerator.LinearFactory mySpikeGeneratorFactory
PoissonSpikeGenerator.SigmoidFactory mySigmoidFactory
boolean oneDimTerminations
int dim
int somaDim
int size
int subUnitNum
float[][] somaEncoders
NEFEnsemble[] Dendrites
NEFEnsemble transfer
NEFEnsemble soma
float[][] myRange
float[] myRadii
IndicatorPDF myDendriteCount
float mySubDifference
DefaultFunctionInterpreter interpreter
int ranges
boolean LIFDendrites
boolean spikingLIFDendrites
java.lang.String myName
java.lang.String myDendriteFunction
java.lang.String myConnectedOrigin
RateFunctionSpikeGenerator.PoiraziDendriteSigmoidFactory pf
java.util.Random r
int range
Function myRateFunction
SimulationMode myMode
float myVoltage
boolean smooth
java.lang.String myName
Node myNode
SpikeGenerator myGenerator
InstantaneousOutput myOutput
boolean myRequiredOnCPU
SynapticIntegrator myIntegrator
SpikeGenerator myGenerator
SpikeGeneratorOrigin mySpikeOrigin
BasicOrigin myCurrentOrigin
float myUnscaledCurrent
TimeSeries1D myCurrent
java.lang.String myName
float myScale
float myBias
float myRadialInput
java.lang.String myDocumentation
Noise myNoise
SynapticIntegratorFactory myIntegratorFactory
SpikeGeneratorFactory myGeneratorFactory
PDF myScale
PDF myBias
float myLastTime
float[][] myPreSpikeHistory
float[][] myPostSpikeHistory
boolean[] myPreSpiking
boolean[] myPostSpiking
float[] myPostTrace1
float[] myPostTrace2
float[] myPreTrace1
float[] myPreTrace2
float myA2Minus
float myA3Minus
float myTauMinus
float myTauX
float myA2Plus
float myA3Plus
float myTauPlus
float myTauY
Projection[] myProjections
Node[] myNodes
ThreadTask[] myTasks
java.util.List<E> myProbeTasks
java.util.Map<K,V> myNodeMap
java.util.List<E> myProbes
Network myNetwork
boolean myDisplayProgress
java.util.Collection<E> mySimulatorListeners
TimeSeries mySeries
IndexFinder myFinder
float[] myTimes
Probeable myTarget
java.lang.String myStateName
boolean myRecord
float[] myTimes
java.util.List<E> myValues
Units[] myUnits
float mySamplingPeriod
float myLastSampleTime
java.lang.String myEnsembleName
ProbeTask myProbeTask
VectorGenerator myVG
boolean myPositiveFlag
float[] myTimes
float[] myValues
Units myUnits
java.lang.String myLabel
java.lang.String myName
float[] myTimes
float[][] myValues
Units[] myUnits
java.lang.String[] myLabels
java.lang.String myName
Node myNode
java.lang.String myName
int myDimension
Units myUnits
InstantaneousOutput myValues
Noise myNoise
Noise[] myNoises
boolean myRequiredOnCPU
ModemContainer modem
org.ros.node.ConnectedNode myRosNode
org.ros.node.topic.Subscriber<T> mySubscription
org.ros.message.MessageListener<T> myListener
float fcn
float startTime
float stopTime
Backend ros
java.util.LinkedList<E> orderedTerminations
java.util.Map<K,V> myWeights
java.util.HashMap<K,V> myTerminations
int counter
java.lang.String name
int dimensions
Node parent
float DEF_W
TimeSeries myValue
Integrator integ
DynamicalSystem lti
Integrator noInt
float myTime
java.util.Properties myProperties
java.util.Map<K,V> myOrigins
java.util.LinkedList<E> orderedOrigins
java.util.Map<K,V> myTerminations
java.util.LinkedList<E> orderedTerminations
java.util.Map<K,V> myEncoders
java.util.LinkedList<E> orderedEncoders
java.lang.String myDocumentation
double t_start
double t_end
double t
java.lang.String myName
Units myU
int myNumGPU
int myNumJavaThreads
boolean myUseGPU
SimulationMode myMode
ModemContainer mc